Takes data from a box geometry file, a group file, and an Atlantis input parameter file
and generates a list object that is the parameter to sh.prm
(see Examples).
make.sh.prm.object(bgm.file, grp.file, prm.file)
Box geometry model (.bgm) file used by Atlantis that defines box boundaries and depths.
Text file (.csv) used by Atlantis containing group attributes.
Text file (.prm) used by Atlantis containing biological parameters.
R list object.
if (FALSE) {
bgm.file <- "SEAP_extended_shelf.bgm"
grp.file <- "SEAP_Groups_Aquacult.csv"
prm.file <- "SEAP_biol_pH_Aquacult.prm"
obj <- make.sh.prm.object(bgm.file, grp.file, prm.file)
sh.prm(obj)
}