Package

shinyrAtlantis

A package for visualising Atlantis input data

Shiny apps

Main shiny apps to display Atlantis input data

sh.prm()

Shiny application for viewing Atlantis biological parameters

sh.init()

Shiny application for viewing Atlantis initialisation data

sh.forcings()

Shiny application for viewing Atlantis forcings data

sh.dist()

Shiny application for generating horizontal distributions

sh.feeding()

Shiny application for viewing Atlantis feeding and growth data

Intermediate get/make functions

Functions used genarate list objects for use in shiny apps

get.init.nc()

Function that generates a csv file of NetCDF values

make.init.nc()

Function that generates a NetCDF file of initial conditions

make.init.csv()

Function that generates two csv initial condition templates

make.sh.dist.object()

Function that generates an object used by sh.dist

make.sh.forcings.object()

Function that generates an object used by sh.forcings

make.sh.init.object()

Function that generates a list object used by sh.init

make.sh.prm.object()

Function that generates a list object used by sh.prm

Examples

Shiny examples based on Antarctica model

SpatialDistributionsExample()

Spatial Distributions Shiny example

DisplayParametersExample()

Spatial Distributions Shiny example

DisplayInitializationExample()

Spatial Distributions Shiny example