atlantistools is a data processing and visualisation tool for R, which helps to process output from Atlantis models within R. Using atlantistools makes sure that Atlantis users use the same input/output file structure which facilitates intra and inter model comparisons.

Installation

Install from CRAN: (Version 0.4.3 only)

install.packages("Atlantis-Ecosystem-Model/atlantistools")

Since version 0.4.3 all development resides on GitHub. To view the changes to atlantistools since version 0.4.3 please read the NEWS.md

To Install the development version from Github:

remotes::install_github("Atlantis-Ecosystem-Model/atlantistools")

Documentation

All documentation can now be found online in the gh-pages branch of this repo

Full documentation can be found here

Vignettes can be found here