Customized theme used in all plots.

Source: R/theme-atlantis.R

This function is a customized theme for ggplot2 plots. It's applied by default to all plots created within atlantistools.

theme_atlantis(
  large = 22,
  medium = 18,
  small = 14,
  scale_font = 1,
  rot_xaxis_text = FALSE,
  rot_strips_y = TRUE
)

Arguments

large

Integer giving the size of the font for the main parts of the plot. Default is 22.
medium

Integer giving the size of the font used in the legend and facet labels. Default is 18.
small

Integer giving the size of the font used in the rest of the plot. Default is 14.
scale_font

Numeric used to scale all font sizes. Default is 1.
rot_xaxis_text

Logical indicating if x-axis text should be rotated by 45 degree. Default is FALSE.
rot_strips_y

Logical indicating if facet labels should be rotated by 90 degree. Default is TRUE.

Examples

if (FALSE) nums_agg <- agg_data(data = ref_nums, groups = c("species", "time"), fun = sum)
ggplot2::ggplot(data = nums_agg, ggplot2::aes(x = time, y = atoutput)) +
   ggplot2::facet_wrap(~species) +
   theme_atlantis()

#> Error in ggplot2::ggplot(data = nums_agg, ggplot2::aes(x = time, y = atoutput)): object 'nums_agg' not found