Plot recruitment.
plot_rec(data, ex_data, ncol = 7)
| data | Dataframe with information about ssb and recruits.
This is created from atlantis output files YOY.txt and SSB.txt
(Usually output[...]YOY.txt' & 'output[...]SSB.txt') using
|
|---|---|
| ex_data | Dataframe to compare the atlantis run with. |
| ncol | Number of columns in multipanel plot. Default is |
ggplot2 object
Other plot functions:
plot_bar(),
plot_boxes(),
plot_diet_bec_dev(),
plot_diet(),
plot_line(),
plot_species()
if (FALSE) { d <- system.file("extdata", "setas-model-new-becdev", package = "atlantistools") ex_data <- read.csv(file.path(d, "setas-ssb-rec.csv"), stringsAsFactors = FALSE) plot_rec(preprocess_setas$ssb_rec, ex_data) }